Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC9.02□□□□□ -0.97
CfdP03953 Gm4454-201ENSMUST00000190585 2578 ntBASIC9.02□□□□□ -0.97
CfdP03953 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CfdP03953 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.02□□□□□ -0.97
CfdP03953 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.01□□□□□ -0.97
CfdP03953 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.01□□□□□ -0.97
CfdP03953 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
CfdP03953 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
CfdP03953 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
CfdP03953 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
CfdP03953 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
CfdP03953 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC9.01□□□□□ -0.97
CfdP03953 Gm13665-201ENSMUST00000120830 528 ntBASIC9.01□□□□□ -0.97
CfdP03953 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.01□□□□□ -0.97
CfdP03953 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.01□□□□□ -0.97
CfdP03953 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.01□□□□□ -0.97
CfdP03953 Gm8062-201ENSMUST00000139696 444 ntBASIC9.01□□□□□ -0.97
CfdP03953 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
CfdP03953 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.01□□□□□ -0.97
CfdP03953 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
CfdP03953 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC9.01□□□□□ -0.97
CfdP03953 Gm7003-201ENSMUST00000195089 312 ntBASIC9.01□□□□□ -0.97
CfdP03953 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC9.01□□□□□ -0.97
CfdP03953 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
CfdP03953 Gm44967-201ENSMUST00000207047 631 ntBASIC9.01□□□□□ -0.97
CfdP03953 Gm45433-201ENSMUST00000209386 247 ntBASIC9.01□□□□□ -0.97
CfdP03953 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.01□□□□□ -0.97
CfdP03953 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.01□□□□□ -0.97
CfdP03953 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.01□□□□□ -0.97
CfdP03953 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.01□□□□□ -0.97
CfdP03953 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Gm10288-201ENSMUST00000084614 537 ntBASIC9.01□□□□□ -0.97
CfdP03953 Gm21811-201ENSMUST00000096485 930 ntBASIC9.01□□□□□ -0.97
CfdP03953 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 AC158779.1-201ENSMUST00000228912 3861 ntBASIC9.01□□□□□ -0.97
CfdP03953 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.01□□□□□ -0.97
CfdP03953 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.01□□□□□ -0.97
CfdP03953 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC9.01□□□□□ -0.97
CfdP03953 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CfdP03953 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CfdP03953 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
CfdP03953 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC9□□□□□ -0.97
CfdP03953 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Gm14398-201ENSMUST00000117287 1073 ntBASIC9□□□□□ -0.97
CfdP03953 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
CfdP03953 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9□□□□□ -0.97
CfdP03953 Gm25492-201ENSMUST00000157383 129 ntBASIC9□□□□□ -0.97
CfdP03953 Gm25881-201ENSMUST00000157783 103 ntBASIC9□□□□□ -0.97
CfdP03953 Gm24749-201ENSMUST00000157838 343 ntBASIC9□□□□□ -0.97
CfdP03953 Gm24844-201ENSMUST00000158679 127 ntBASIC9□□□□□ -0.97
CfdP03953 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9□□□□□ -0.97
CfdP03953 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC9□□□□□ -0.97
CfdP03953 Gm27516-201ENSMUST00000184237 98 ntBASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms