Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 AC117648.1-201ENSMUST00000219777 2510 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Pcdh1F7BJK1 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Pcdh1F7BJK1 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Pcdh1F7BJK1 Gm37697-201ENSMUST00000195680 1844 ntBASIC9.77□□□□□ -0.84
Pcdh1F7BJK1 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.77□□□□□ -0.84
Pcdh1F7BJK1 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Pcdh1F7BJK1 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Pcdh1F7BJK1 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.77□□□□□ -0.84
Pcdh1F7BJK1 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Pcdh1F7BJK1 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Pcdh1F7BJK1 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Pcdh1F7BJK1 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Pcdh1F7BJK1 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Gm4917-201ENSMUST00000121452 650 ntBASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Mir6927-201ENSMUST00000184494 71 ntBASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Gm30946-201ENSMUST00000198288 724 ntBASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pcdh1F7BJK1 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm15615-201ENSMUST00000118876 198 ntBASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm12337-201ENSMUST00000119634 400 ntBASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm37852-201ENSMUST00000193027 350 ntBASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm37835-201ENSMUST00000193305 361 ntBASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm19091-201ENSMUST00000208120 978 ntBASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms