Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Gm3372-201ENSMUST00000198806 1792 ntBASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3550W4VSN7 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Gm3550W4VSN7 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Gm13611-201ENSMUST00000118269 318 ntBASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Gm20426-201ENSMUST00000173657 440 ntBASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Gm28032-201ENSMUST00000184104 96 ntBASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Gm30946-201ENSMUST00000198288 724 ntBASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Gm44323-201ENSMUST00000198689 129 ntBASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Gm9132-201ENSMUST00000210182 832 ntBASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Mt1-202ENSMUST00000211807 1085 ntBASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.21□□□□□ -0.94
Gm3550W4VSN7 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Gm3550W4VSN7 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC9.2□□□□□ -0.94
Gm3550W4VSN7 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms