Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm7985-201ENSMUST00000183329 981 ntBASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Gm33707-201ENSMUST00000195135 569 ntBASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Gm44420-201ENSMUST00000203669 490 ntBASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Gm18123-201ENSMUST00000210874 822 ntBASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC10.68□□□□□ -0.7
Rrp8Q9DB85 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Gm10254-201ENSMUST00000052888 867 ntBASIC10.68□□□□□ -0.7
Rrp8Q9DB85 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Gm8684-201ENSMUST00000195078 1564 ntBASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rrp8Q9DB85 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 AC154354.1-203ENSMUST00000225565 1364 ntBASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm24140-201ENSMUST00000122773 326 ntBASIC10.67□□□□□ -0.7
Rrp8Q9DB85 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm7928-201ENSMUST00000181249 701 ntBASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm27444-201ENSMUST00000184157 137 ntBASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm28671-201ENSMUST00000187036 692 ntBASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm7539-201ENSMUST00000189789 630 ntBASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm7445-201ENSMUST00000192115 340 ntBASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Ighv1-70-201ENSMUST00000196509 351 ntBASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm6794-201ENSMUST00000203829 457 ntBASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.67□□□□□ -0.7
Rrp8Q9DB85 CT030035.1-201ENSMUST00000223964 935 ntBASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 AC166361.2-201ENSMUST00000219269 1415 ntBASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rrp8Q9DB85 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rrp8Q9DB85 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms