Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Chmp2aQ9DB34 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Chmp2aQ9DB34 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Chmp2aQ9DB34 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Gm17221-201ENSMUST00000163909 481 ntBASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Gm17073-201ENSMUST00000168069 556 ntBASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Gm5302-201ENSMUST00000202130 796 ntBASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Gm3793-201ENSMUST00000204973 672 ntBASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Gm3619-201ENSMUST00000219947 775 ntBASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp2aQ9DB34 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Gm9673-201ENSMUST00000119287 781 ntBASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Gm9135-201ENSMUST00000182963 990 ntBASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Gm19927-201ENSMUST00000185792 781 ntBASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms