Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Gm45041-201ENSMUST00000207366 3108 ntBASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Gm12029-201ENSMUST00000120073 832 ntBASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Gm22138-201ENSMUST00000158748 128 ntBASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Gm5210-201ENSMUST00000182150 1010 ntBASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Gm19091-201ENSMUST00000208120 978 ntBASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Gm45118-201ENSMUST00000208928 825 ntBASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Gm7589-201ENSMUST00000085631 534 ntBASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Hyal2-206ENSMUST00000195681 2968 ntBASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Mir453-201ENSMUST00000104732 82 ntBASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Gm5944-201ENSMUST00000118182 1001 ntBASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Gm14460-201ENSMUST00000121511 639 ntBASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Gm18466-201ENSMUST00000209147 499 ntBASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 AC134793.1-202ENSMUST00000227444 803 ntBASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Chmp4bQ9D8B3 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4bQ9D8B3 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms