Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC10.23□□□□□ -0.77
Nkd1Q99MH6 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkd1Q99MH6 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkd1Q99MH6 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkd1Q99MH6 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Nkd1Q99MH6 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Nkd1Q99MH6 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkd1Q99MH6 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkd1Q99MH6 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nkd1Q99MH6 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Gm12165-201ENSMUST00000117047 342 ntBASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Gm13183-201ENSMUST00000118615 789 ntBASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.22□□□□□ -0.77
Nkd1Q99MH6 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Gm38321-201ENSMUST00000195053 235 ntBASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Gm5363-201ENSMUST00000211927 938 ntBASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.22□□□□□ -0.77
Nkd1Q99MH6 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkd1Q99MH6 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Gm13422-201ENSMUST00000118834 504 ntBASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Mir7686-201ENSMUST00000200604 57 ntBASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Gm32111-201ENSMUST00000207689 846 ntBASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.21□□□□□ -0.77
Nkd1Q99MH6 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.21□□□□□ -0.77
Nkd1Q99MH6 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Gm5451-201ENSMUST00000080545 579 ntBASIC10.21□□□□□ -0.77
Nkd1Q99MH6 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nkd1Q99MH6 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms