Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.21□□□□□ -0.61
Trim60Q8VI40 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.21□□□□□ -0.61
Trim60Q8VI40 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.21□□□□□ -0.61
Trim60Q8VI40 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.21□□□□□ -0.61
Trim60Q8VI40 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.21□□□□□ -0.61
Trim60Q8VI40 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim60Q8VI40 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trim60Q8VI40 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trim60Q8VI40 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC11.21□□□□□ -0.62
Trim60Q8VI40 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim60Q8VI40 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trim60Q8VI40 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.21□□□□□ -0.62
Trim60Q8VI40 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim60Q8VI40 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trim60Q8VI40 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.21□□□□□ -0.62
Trim60Q8VI40 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.2□□□□□ -0.62
Trim60Q8VI40 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm4726-201ENSMUST00000135604 736 ntBASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm6019-201ENSMUST00000148369 736 ntBASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm3551-201ENSMUST00000190750 664 ntBASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm37826-201ENSMUST00000195329 322 ntBASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm45310-201ENSMUST00000210436 275 ntBASIC11.2□□□□□ -0.62
Trim60Q8VI40 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.2□□□□□ -0.62
Trim60Q8VI40 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.2□□□□□ -0.62
Trim60Q8VI40 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms