Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm25554-201ENSMUST00000158075 113 ntBASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm25226-201ENSMUST00000158198 123 ntBASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm22138-201ENSMUST00000158748 128 ntBASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm37852-201ENSMUST00000193027 350 ntBASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm44329-201ENSMUST00000197469 112 ntBASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm42859-201ENSMUST00000199572 193 ntBASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim29Q8R2Q0 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trim29Q8R2Q0 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim29Q8R2Q0 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trim29Q8R2Q0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Trim29Q8R2Q0 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim29Q8R2Q0 Gm43274-201ENSMUST00000202545 5000 ntBASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Gm15264-201ENSMUST00000118050 502 ntBASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Gm3828-201ENSMUST00000121817 257 ntBASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Gm14665-201ENSMUST00000122294 557 ntBASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Gm26134-201ENSMUST00000178484 110 ntBASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Gm42657-201ENSMUST00000201746 211 ntBASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim29Q8R2Q0 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms