Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm9102-201ENSMUST00000219250 465 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm19009-201ENSMUST00000223072 823 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.24□□□□□ -0.77
Clrn1Q8K445 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Snord23-201ENSMUST00000116828 109 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm14270-201ENSMUST00000118388 846 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm27441-201ENSMUST00000185000 105 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm19927-201ENSMUST00000185792 781 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm28746-201ENSMUST00000187453 380 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm44814-201ENSMUST00000207018 434 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm18556-201ENSMUST00000219748 1031 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.24□□□□□ -0.77
Clrn1Q8K445 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Clrn1Q8K445 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm38116-201ENSMUST00000193873 1533 ntBASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.23□□□□□ -0.77
Clrn1Q8K445 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.23□□□□□ -0.77
Clrn1Q8K445 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.23□□□□□ -0.77
Clrn1Q8K445 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms