Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Gm22042-201ENSMUST00000082989 165 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Gm26110-201ENSMUST00000083971 165 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Vmn2r-ps97-201ENSMUST00000222427 1970 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm22323-201ENSMUST00000103832 109 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm8111-201ENSMUST00000117659 987 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Olfr73-202ENSMUST00000129056 3048 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm23085-201ENSMUST00000157849 293 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm21778-201ENSMUST00000178779 471 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm12407-201ENSMUST00000180219 324 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm29067-201ENSMUST00000190821 470 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm7003-201ENSMUST00000195089 312 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm44262-201ENSMUST00000204969 372 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Gm25857-201ENSMUST00000082788 129 ntBASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Ccdc28bQ8CEG5 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccdc28bQ8CEG5 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccdc28bQ8CEG5 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccdc28bQ8CEG5 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Ccdc28bQ8CEG5 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Ccdc28bQ8CEG5 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccdc28bQ8CEG5 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Ccdc28bQ8CEG5 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccdc28bQ8CEG5 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Ccdc28bQ8CEG5 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccdc28bQ8CEG5 Gm16478-201ENSMUST00000208113 5084 ntBASIC10.71□□□□□ -0.7
Ccdc28bQ8CEG5 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccdc28bQ8CEG5 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Ccdc28bQ8CEG5 Gm10531-201ENSMUST00000193527 2303 ntBASIC10.7□□□□□ -0.7
Ccdc28bQ8CEG5 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccdc28bQ8CEG5 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccdc28bQ8CEG5 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms