Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Mir483-201ENSMUST00000093631 73 ntBASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm25053-201ENSMUST00000103982 133 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm25922-201ENSMUST00000104281 130 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm24248-201ENSMUST00000157321 322 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm24074-201ENSMUST00000158178 260 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm24679-201ENSMUST00000158762 111 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm19587-201ENSMUST00000191395 545 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm25053-202ENSMUST00000199731 132 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm5302-201ENSMUST00000202130 796 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm9111-201ENSMUST00000219394 709 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup88Q8CEC0 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Gm13549-201ENSMUST00000118339 796 ntBASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Gm9673-201ENSMUST00000119287 781 ntBASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Gm21778-201ENSMUST00000178779 471 ntBASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms