Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm38910-201ENSMUST00000204630 2448 ntBASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm20426-201ENSMUST00000173657 440 ntBASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm37299-201ENSMUST00000193951 826 ntBASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm43372-201ENSMUST00000202662 3016 ntBASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm42826-201ENSMUST00000197548 2639 ntBASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc38Q8CDN8 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 B9d1os-201ENSMUST00000137010 674 ntBASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Mir7070-201ENSMUST00000183657 86 ntBASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Gm40414-201ENSMUST00000197608 481 ntBASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Gm43378-201ENSMUST00000199336 582 ntBASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Gm9132-201ENSMUST00000210182 832 ntBASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Id2-203ENSMUST00000222667 958 ntBASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms