Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm22334-201ENSMUST00000158070 133 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm7589-201ENSMUST00000085631 534 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm14263-201ENSMUST00000117955 746 ntBASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm9673-201ENSMUST00000119287 781 ntBASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm13937-201ENSMUST00000121000 988 ntBASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm13182-201ENSMUST00000122241 312 ntBASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm22902-201ENSMUST00000158488 302 ntBASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm43097-201ENSMUST00000196867 151 ntBASIC11.17□□□□□ -0.62
Trub1Q8C0D0 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trub1Q8C0D0 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Gm18466-201ENSMUST00000209147 499 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms