Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Gm11919-201ENSMUST00000117609 721 ntBASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Gm5764-201ENSMUST00000118817 885 ntBASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Gm25125-201ENSMUST00000083340 136 ntBASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Gm25514-201ENSMUST00000083860 135 ntBASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Gm5526-201ENSMUST00000153604 423 ntBASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Mir6387-201ENSMUST00000184042 108 ntBASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Gm45094-201ENSMUST00000207013 617 ntBASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sh3rf2Q8BZT2 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms