Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gm26208-201ENSMUST00000158677 124 ntBASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Kif4-ps-202ENSMUST00000185083 652 ntBASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gm18182-201ENSMUST00000191380 1251 ntBASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gm18122-201ENSMUST00000211390 904 ntBASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gm4865-201ENSMUST00000196284 1309 ntBASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm22388-201ENSMUST00000158194 248 ntBASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm20694-201ENSMUST00000176943 404 ntBASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm18443-201ENSMUST00000185358 556 ntBASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm5190-201ENSMUST00000192434 357 ntBASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm9515-201ENSMUST00000200276 647 ntBASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm42710-201ENSMUST00000200608 985 ntBASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm44236-201ENSMUST00000204492 513 ntBASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm18862-201ENSMUST00000204643 933 ntBASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx55Q6ZPL9 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm15626-201ENSMUST00000117478 868 ntBASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm6276-201ENSMUST00000120159 579 ntBASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm6517-201ENSMUST00000121056 511 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms