Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm7319-201ENSMUST00000210047 778 ntBASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm29689-201ENSMUST00000221076 589 ntBASIC12.6□□□□□ -0.39
Nup98Q6PFD9 AC123533.3-201ENSMUST00000228056 454 ntBASIC12.6□□□□□ -0.39
Nup98Q6PFD9 AC161581.1-201ENSMUST00000228696 318 ntBASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Gm6630-201ENSMUST00000119199 454 ntBASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Gm29808-201ENSMUST00000194419 468 ntBASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Gm43117-201ENSMUST00000198531 379 ntBASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Gm43106-201ENSMUST00000199485 637 ntBASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Gm4880-201ENSMUST00000207645 1696 ntBASIC12.59□□□□□ -0.39
Nup98Q6PFD9 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup98Q6PFD9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Nup98Q6PFD9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nup98Q6PFD9 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Gm14633-201ENSMUST00000121152 470 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Gm25394-201ENSMUST00000157338 133 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 AC130217.1-201ENSMUST00000224146 909 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Gm8618-201ENSMUST00000097570 432 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Gm10617-201ENSMUST00000098368 1172 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Gm15815-201ENSMUST00000120569 255 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Gm37597-201ENSMUST00000191853 382 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Gm17815-201ENSMUST00000198305 895 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Gm6008-201ENSMUST00000206542 874 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 AC242269.1-201ENSMUST00000227020 741 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.58□□□□□ -0.4
Nup98Q6PFD9 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms