Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Ces1e-203ENSMUST00000176282 1883 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gli3Q61602 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC14.25□□□□□ -0.13
Gli3Q61602 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli3Q61602 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli3Q61602 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli3Q61602 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gli3Q61602 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gli3Q61602 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC14.24□□□□□ -0.13
Gli3Q61602 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Gm28905-202ENSMUST00000219328 1377 ntTSL 5 BASIC14.24□□□□□ -0.13
Gli3Q61602 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Gm5054-201ENSMUST00000119351 453 ntBASIC14.24□□□□□ -0.13
Gli3Q61602 Gm12817-201ENSMUST00000119622 610 ntBASIC14.24□□□□□ -0.13
Gli3Q61602 Gm15798-201ENSMUST00000120082 408 ntBASIC14.24□□□□□ -0.13
Gli3Q61602 Gm6298-201ENSMUST00000122262 981 ntBASIC14.24□□□□□ -0.13
Gli3Q61602 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gli3Q61602 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Gm15645-202ENSMUST00000183393 1299 ntBASIC14.24□□□□□ -0.13
Gli3Q61602 Gm8982-201ENSMUST00000184198 1295 ntBASIC14.24□□□□□ -0.13
Gli3Q61602 Gm38132-201ENSMUST00000193358 707 ntTSL 3 BASIC14.24□□□□□ -0.13
Gli3Q61602 Gm36973-201ENSMUST00000193942 259 ntBASIC14.24□□□□□ -0.13
Gli3Q61602 Gm37232-201ENSMUST00000194887 367 ntBASIC14.24□□□□□ -0.13
Gli3Q61602 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC14.24□□□□□ -0.13
Gli3Q61602 Psme1-201ENSMUST00000089619 711 ntTSL 5 BASIC14.24□□□□□ -0.13
Gli3Q61602 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gli3Q61602 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Rufy3-202ENSMUST00000196686 2077 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli3Q61602 Gm10686-201ENSMUST00000215389 3247 ntBASIC14.24□□□□□ -0.13
Gli3Q61602 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Gm19173-201ENSMUST00000204494 1523 ntBASIC14.23□□□□□ -0.13
Gli3Q61602 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Gli3Q61602 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC14.23□□□□□ -0.13
Gli3Q61602 Gm9670-201ENSMUST00000121201 540 ntBASIC14.23□□□□□ -0.13
Gli3Q61602 Gm15777-201ENSMUST00000123463 876 ntTSL 3 BASIC14.23□□□□□ -0.13
Gli3Q61602 Gm16304-201ENSMUST00000129972 775 ntBASIC14.23□□□□□ -0.13
Gli3Q61602 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 1700057H15Rik-202ENSMUST00000143859 704 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC14.23□□□□□ -0.13
Gli3Q61602 Gm29471-201ENSMUST00000190527 700 ntBASIC14.23□□□□□ -0.13
Gli3Q61602 Gm8022-201ENSMUST00000191763 904 ntBASIC14.23□□□□□ -0.13
Gli3Q61602 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC14.23□□□□□ -0.13
Gli3Q61602 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC14.23□□□□□ -0.13
Gli3Q61602 Gm45521-201ENSMUST00000211339 676 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gli3Q61602 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC14.23□□□□□ -0.13
Gli3Q61602 Dppa5a-201ENSMUST00000071991 619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 1700010B08Rik-201ENSMUST00000073081 899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.23□□□□□ -0.13
Gli3Q61602 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Gli3Q61602 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Gm5397-201ENSMUST00000121081 1453 ntBASIC14.23□□□□□ -0.13
Gli3Q61602 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli3Q61602 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli3Q61602 Rhox10-201ENSMUST00000115150 763 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli3Q61602 Gm12489-201ENSMUST00000119364 148 ntBASIC14.22□□□□□ -0.13
Gli3Q61602 Gm5776-201ENSMUST00000122119 321 ntBASIC14.22□□□□□ -0.13
Gli3Q61602 Gm23081-201ENSMUST00000157845 297 ntBASIC14.22□□□□□ -0.13
Gli3Q61602 Gm22347-201ENSMUST00000180276 132 ntBASIC14.22□□□□□ -0.13
Gli3Q61602 2410021H03Rik-201ENSMUST00000187090 764 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gli3Q61602 Apoc1-204ENSMUST00000207978 339 ntTSL 3 BASIC14.22□□□□□ -0.13
Gli3Q61602 Gm39128-201ENSMUST00000208237 1094 ntTSL 5 BASIC14.22□□□□□ -0.13
Gli3Q61602 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC14.22□□□□□ -0.13
Gli3Q61602 Gm6960-201ENSMUST00000051629 639 ntBASIC14.22□□□□□ -0.13
Gli3Q61602 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli3Q61602 Mir25-201ENSMUST00000083460 84 ntBASIC14.22□□□□□ -0.13
Gli3Q61602 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC14.22□□□□□ -0.13
Gli3Q61602 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gli3Q61602 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli3Q61602 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms