Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.97□□□□□ -0.49
Ift88Q61371 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ift88Q61371 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ift88Q61371 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.96□□□□□ -0.49
Ift88Q61371 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.96□□□□□ -0.49
Ift88Q61371 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC11.96□□□□□ -0.49
Ift88Q61371 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ift88Q61371 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ift88Q61371 Gm11949-201ENSMUST00000117640 372 ntBASIC11.96□□□□□ -0.49
Ift88Q61371 Gm12337-201ENSMUST00000119634 400 ntBASIC11.96□□□□□ -0.49
Ift88Q61371 Gm13284-201ENSMUST00000121020 547 ntBASIC11.96□□□□□ -0.49
Ift88Q61371 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.96□□□□□ -0.49
Ift88Q61371 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 Gm19353-201ENSMUST00000184561 445 ntBASIC11.96□□□□□ -0.49
Ift88Q61371 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.96□□□□□ -0.49
Ift88Q61371 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.96□□□□□ -0.49
Ift88Q61371 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ift88Q61371 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.96□□□□□ -0.49
Ift88Q61371 Gm40414-201ENSMUST00000197608 481 ntBASIC11.96□□□□□ -0.49
Ift88Q61371 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.96□□□□□ -0.49
Ift88Q61371 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ift88Q61371 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.96□□□□□ -0.49
Ift88Q61371 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ift88Q61371 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.96□□□□□ -0.5
Ift88Q61371 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ift88Q61371 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ift88Q61371 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ift88Q61371 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ift88Q61371 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ift88Q61371 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ift88Q61371 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ift88Q61371 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ift88Q61371 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.95□□□□□ -0.5
Ift88Q61371 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ift88Q61371 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Ift88Q61371 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.95□□□□□ -0.5
Ift88Q61371 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
Ift88Q61371 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.95□□□□□ -0.5
Ift88Q61371 Gm13045-201ENSMUST00000119019 712 ntBASIC11.95□□□□□ -0.5
Ift88Q61371 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.95□□□□□ -0.5
Ift88Q61371 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.95□□□□□ -0.5
Ift88Q61371 Gm4812-201ENSMUST00000182847 993 ntBASIC11.95□□□□□ -0.5
Ift88Q61371 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.95□□□□□ -0.5
Ift88Q61371 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Ift88Q61371 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ift88Q61371 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ift88Q61371 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.95□□□□□ -0.5
Ift88Q61371 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ift88Q61371 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.94□□□□□ -0.5
Ift88Q61371 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.94□□□□□ -0.5
Ift88Q61371 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Ift88Q61371 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.94□□□□□ -0.5
Ift88Q61371 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.94□□□□□ -0.5
Ift88Q61371 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ift88Q61371 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms