Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC8.44□□□□□ -1.06
Cdx4Q07424 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC8.44□□□□□ -1.06
Cdx4Q07424 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC8.44□□□□□ -1.06
Cdx4Q07424 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC8.44□□□□□ -1.06
Cdx4Q07424 AC166341.2-201ENSMUST00000220571 120 ntBASIC8.44□□□□□ -1.06
Cdx4Q07424 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC8.44□□□□□ -1.06
Cdx4Q07424 CT573047.1-201ENSMUST00000223652 851 ntBASIC8.44□□□□□ -1.06
Cdx4Q07424 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Cdx4Q07424 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Cdx4Q07424 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Cdx4Q07424 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC8.44□□□□□ -1.06
Cdx4Q07424 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Gm9915-201ENSMUST00000066196 1383 ntBASIC8.44□□□□□ -1.06
Cdx4Q07424 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Gm5171-201ENSMUST00000214944 1415 ntBASIC8.44□□□□□ -1.06
Cdx4Q07424 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC8.44□□□□□ -1.06
Cdx4Q07424 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC8.44□□□□□ -1.06
Cdx4Q07424 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC8.44□□□□□ -1.06
Cdx4Q07424 Gm43127-201ENSMUST00000195890 2789 ntBASIC8.44□□□□□ -1.06
Cdx4Q07424 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cdx4Q07424 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Cdx4Q07424 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm25063-201ENSMUST00000104666 94 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm14892-201ENSMUST00000117636 267 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm4993-201ENSMUST00000118719 1174 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm12274-201ENSMUST00000120062 385 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm14219-201ENSMUST00000120414 288 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm15329-201ENSMUST00000121408 155 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Mir1956-201ENSMUST00000157748 65 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Rn7s6-201ENSMUST00000175005 291 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Uba52-ps-201ENSMUST00000183770 379 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm37028-201ENSMUST00000194276 107 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm45594-201ENSMUST00000211717 241 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Cdx4Q07424 CT025551.1-201ENSMUST00000223996 692 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Lgi3-203ENSMUST00000226548 1001 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 AC125409.1-201ENSMUST00000223213 3370 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Gm45191-201ENSMUST00000205846 5439 ntBASIC8.43□□□□□ -1.06
Cdx4Q07424 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Cdx4Q07424 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cdx4Q07424 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms