Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Smarcc1P97496 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Atf7-201ENSMUST00000096143 390 ntBASIC13.64□□□□□ -0.23
Smarcc1P97496 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcc1P97496 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcc1P97496 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smarcc1P97496 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.63□□□□□ -0.23
Smarcc1P97496 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarcc1P97496 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.63□□□□□ -0.23
Smarcc1P97496 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smarcc1P97496 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarcc1P97496 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcc1P97496 Gm29101-201ENSMUST00000188329 1471 ntBASIC13.63□□□□□ -0.23
Smarcc1P97496 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarcc1P97496 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC13.63□□□□□ -0.23
Smarcc1P97496 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC13.63□□□□□ -0.23
Smarcc1P97496 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarcc1P97496 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC13.63□□□□□ -0.23
Smarcc1P97496 BB187690-201ENSMUST00000198619 1176 ntBASIC13.63□□□□□ -0.23
Smarcc1P97496 Gm44540-201ENSMUST00000205640 354 ntBASIC13.63□□□□□ -0.23
Smarcc1P97496 Gm44917-201ENSMUST00000208798 520 ntBASIC13.63□□□□□ -0.23
Smarcc1P97496 AC124356.1-201ENSMUST00000221469 698 ntBASIC13.63□□□□□ -0.23
Smarcc1P97496 AC134860.2-201ENSMUST00000225277 1036 ntBASIC13.63□□□□□ -0.23
Smarcc1P97496 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarcc1P97496 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcc1P97496 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
Smarcc1P97496 Gfra2-203ENSMUST00000227697 1323 ntBASIC13.63□□□□□ -0.23
Smarcc1P97496 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc1P97496 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Smarcc1P97496 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smarcc1P97496 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC13.62□□□□□ -0.23
Smarcc1P97496 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Gm12950-201ENSMUST00000121683 417 ntBASIC13.62□□□□□ -0.23
Smarcc1P97496 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC13.62□□□□□ -0.23
Smarcc1P97496 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Gm24346-201ENSMUST00000158712 194 ntBASIC13.62□□□□□ -0.23
Smarcc1P97496 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Gm17799-201ENSMUST00000183270 667 ntBASIC13.62□□□□□ -0.23
Smarcc1P97496 Kif4-ps-202ENSMUST00000185083 652 ntBASIC13.62□□□□□ -0.23
Smarcc1P97496 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Smarcc1P97496 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC13.62□□□□□ -0.23
Smarcc1P97496 Gm45090-201ENSMUST00000208775 1148 ntBASIC13.62□□□□□ -0.23
Smarcc1P97496 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC13.62□□□□□ -0.23
Smarcc1P97496 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarcc1P97496 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc1P97496 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Smarcc1P97496 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.61□□□□□ -0.23
Smarcc1P97496 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcc1P97496 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm12716-201ENSMUST00000120606 1354 ntBASIC13.61□□□□□ -0.23
Smarcc1P97496 AC154197.1-201ENSMUST00000225136 1382 ntBASIC13.61□□□□□ -0.23
Smarcc1P97496 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smarcc1P97496 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms