Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Lsm6P62313 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC9.55□□□□□ -0.88
Lsm6P62313 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC9.55□□□□□ -0.88
Lsm6P62313 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.55□□□□□ -0.88
Lsm6P62313 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Gm15264-201ENSMUST00000118050 502 ntBASIC9.55□□□□□ -0.88
Lsm6P62313 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Lsm6P62313 Gm13019-201ENSMUST00000120000 276 ntBASIC9.55□□□□□ -0.88
Lsm6P62313 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.55□□□□□ -0.88
Lsm6P62313 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.55□□□□□ -0.88
Lsm6P62313 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Lsm6P62313 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Gm19927-201ENSMUST00000185792 781 ntBASIC9.55□□□□□ -0.88
Lsm6P62313 Gm17877-201ENSMUST00000192578 814 ntBASIC9.55□□□□□ -0.88
Lsm6P62313 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Lsm6P62313 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Lsm6P62313 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
Lsm6P62313 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.55□□□□□ -0.88
Lsm6P62313 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Lsm6P62313 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.55□□□□□ -0.88
Lsm6P62313 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.55□□□□□ -0.88
Lsm6P62313 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.55□□□□□ -0.88
Lsm6P62313 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm6P62313 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC9.54□□□□□ -0.88
Lsm6P62313 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Lsm6P62313 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.54□□□□□ -0.88
Lsm6P62313 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Lsm6P62313 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Gm1848-201ENSMUST00000120711 789 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Gm12516-201ENSMUST00000120819 385 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Gm24398-201ENSMUST00000157870 109 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Gm26134-201ENSMUST00000178484 110 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Gm37986-201ENSMUST00000193285 383 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.54□□□□□ -0.88
Lsm6P62313 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Gm42816-201ENSMUST00000198433 325 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Gm43380-201ENSMUST00000200421 220 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 Gm8162-201ENSMUST00000213951 665 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.54□□□□□ -0.88
Lsm6P62313 AC154680.1-201ENSMUST00000224376 859 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms