Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm9860-201ENSMUST00000211426 3653 ntBASIC9.76□□□□□ -0.85
Lsm3P62311 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Lsm3P62311 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 AC115891.3-201ENSMUST00000219161 2472 ntBASIC9.76□□□□□ -0.85
Lsm3P62311 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC9.76□□□□□ -0.85
Lsm3P62311 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Lsm3P62311 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Lsm3P62311 Rad51d-201ENSMUST00000018985 3426 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.76□□□□□ -0.85
Lsm3P62311 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Lsm3P62311 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm4482-201ENSMUST00000200876 742 ntBASIC9.76□□□□□ -0.85
Lsm3P62311 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.76□□□□□ -0.85
Lsm3P62311 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.76□□□□□ -0.85
Lsm3P62311 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm44926-201ENSMUST00000207898 1826 ntBASIC9.76□□□□□ -0.85
Lsm3P62311 Csnk2a1-201ENSMUST00000099224 4206 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Lsm3P62311 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Mbd1-201ENSMUST00000097530 2833 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Lsm3P62311 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Lsm3P62311 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.76□□□□□ -0.85
Lsm3P62311 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.76□□□□□ -0.85
Lsm3P62311 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.75□□□□□ -0.85
Lsm3P62311 Rffl-204ENSMUST00000093975 3575 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Tsr2-202ENSMUST00000112683 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Pigq-202ENSMUST00000097368 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Lsm3P62311 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Inpp4a-207ENSMUST00000136846 3576 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Lsm3P62311 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC9.75□□□□□ -0.85
Lsm3P62311 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Gm27731-201ENSMUST00000185192 107 ntBASIC9.75□□□□□ -0.85
Lsm3P62311 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.75□□□□□ -0.85
Lsm3P62311 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.75□□□□□ -0.85
Lsm3P62311 Gm43916-201ENSMUST00000205062 967 ntBASIC9.75□□□□□ -0.85
Lsm3P62311 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.75□□□□□ -0.85
Lsm3P62311 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Lsm3P62311 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Tmprss13-201ENSMUST00000034597 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Lsm3P62311 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Lsm3P62311 Sdhaf3-201ENSMUST00000040826 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Sypl-202ENSMUST00000076698 4999 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Lsm3P62311 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm3P62311 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms