Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC8.41□□□□□ -1.06
Ctdsp1P58466 Tuba4a-202ENSMUST00000186213 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ctdsp1P58466 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC8.41□□□□□ -1.06
Ctdsp1P58466 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Ctdsp1P58466 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ctdsp1P58466 Gm38014-201ENSMUST00000193349 2612 ntBASIC8.41□□□□□ -1.06
Ctdsp1P58466 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ctdsp1P58466 Osbpl5-201ENSMUST00000020411 3994 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ctdsp1P58466 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC8.41□□□□□ -1.06
Ctdsp1P58466 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ctdsp1P58466 Cd300a-202ENSMUST00000106582 4645 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ctdsp1P58466 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Ctdsp1P58466 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ctdsp1P58466 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Ctdsp1P58466 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Nudt13-207ENSMUST00000224311 1574 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm11736-201ENSMUST00000121468 505 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm25043-201ENSMUST00000158604 212 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm24548-201ENSMUST00000158650 108 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Mrip-ps-201ENSMUST00000184613 940 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm5266-201ENSMUST00000187302 1162 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm28196-201ENSMUST00000187719 640 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm28911-201ENSMUST00000188837 117 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC8.4□□□□□ -1.06
Ctdsp1P58466 1700063K16Rik-202ENSMUST00000191341 952 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm38117-201ENSMUST00000194653 939 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm43575-201ENSMUST00000196420 516 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm44551-201ENSMUST00000208804 171 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm9619-201ENSMUST00000211587 762 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm18935-201ENSMUST00000212692 664 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC8.4□□□□□ -1.06
Ctdsp1P58466 AC139382.1-201ENSMUST00000221402 498 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm6722-201ENSMUST00000221586 390 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Gm45139-201ENSMUST00000206543 2057 ntBASIC8.4□□□□□ -1.06
Ctdsp1P58466 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Sh3tc1-207ENSMUST00000201511 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ctdsp1P58466 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Kdm2b-205ENSMUST00000121739 4107 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Ptk2b-201ENSMUST00000022622 4034 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Plod1-201ENSMUST00000019199 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ctdsp1P58466 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Acot12-201ENSMUST00000022120 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Pde6a-201ENSMUST00000025468 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Ctdsp1P58466 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ctdsp1P58466 Gm42879-201ENSMUST00000198656 2214 ntBASIC8.39□□□□□ -1.07
Ctdsp1P58466 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ctdsp1P58466 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ctdsp1P58466 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ctdsp1P58466 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ctdsp1P58466 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Ctdsp1P58466 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ctdsp1P58466 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ctdsp1P58466 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ctdsp1P58466 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
Ctdsp1P58466 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ctdsp1P58466 AU018091-201ENSMUST00000171749 3449 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ctdsp1P58466 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ctdsp1P58466 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ctdsp1P58466 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms