Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrp1P56183 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrp1P56183 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.21□□□□□ -0.45
Rrp1P56183 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rrp1P56183 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrp1P56183 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rrp1P56183 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrp1P56183 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrp1P56183 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrp1P56183 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrp1P56183 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrp1P56183 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rrp1P56183 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Rrp1P56183 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.21□□□□□ -0.45
Rrp1P56183 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.21□□□□□ -0.45
Rrp1P56183 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rrp1P56183 Gm10051-201ENSMUST00000145209 414 ntBASIC12.21□□□□□ -0.45
Rrp1P56183 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rrp1P56183 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.21□□□□□ -0.45
Rrp1P56183 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rrp1P56183 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.21□□□□□ -0.45
Rrp1P56183 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rrp1P56183 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rrp1P56183 Gm6677-201ENSMUST00000195100 441 ntBASIC12.21□□□□□ -0.45
Rrp1P56183 Gm9555-201ENSMUST00000200908 583 ntBASIC12.21□□□□□ -0.45
Rrp1P56183 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Rrp1P56183 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.21□□□□□ -0.45
Rrp1P56183 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.21□□□□□ -0.45
Rrp1P56183 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.21□□□□□ -0.45
Rrp1P56183 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC12.21□□□□□ -0.45
Rrp1P56183 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrp1P56183 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rrp1P56183 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rrp1P56183 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rrp1P56183 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rrp1P56183 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rrp1P56183 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rrp1P56183 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rrp1P56183 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rrp1P56183 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rrp1P56183 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC12.2□□□□□ -0.46
Rrp1P56183 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.2□□□□□ -0.46
Rrp1P56183 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.2□□□□□ -0.46
Rrp1P56183 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.2□□□□□ -0.46
Rrp1P56183 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.2□□□□□ -0.46
Rrp1P56183 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Rrp1P56183 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Gm23045-201ENSMUST00000175041 96 ntBASIC12.2□□□□□ -0.46
Rrp1P56183 Gm19353-201ENSMUST00000184561 445 ntBASIC12.2□□□□□ -0.46
Rrp1P56183 Mir8115-201ENSMUST00000184992 119 ntBASIC12.2□□□□□ -0.46
Rrp1P56183 Gm27953-201ENSMUST00000185171 143 ntBASIC12.2□□□□□ -0.46
Rrp1P56183 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.2□□□□□ -0.46
Rrp1P56183 Gm37986-201ENSMUST00000193285 383 ntBASIC12.2□□□□□ -0.46
Rrp1P56183 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.2□□□□□ -0.46
Rrp1P56183 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.2□□□□□ -0.46
Rrp1P56183 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.2□□□□□ -0.46
Rrp1P56183 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.2□□□□□ -0.46
Rrp1P56183 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.2□□□□□ -0.46
Rrp1P56183 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.2□□□□□ -0.46
Rrp1P56183 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Rrp1P56183 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC12.2□□□□□ -0.46
Rrp1P56183 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rrp1P56183 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Gm21115-201ENSMUST00000187565 2578 ntBASIC12.2□□□□□ -0.46
Rrp1P56183 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp1P56183 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Rrp1P56183 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rrp1P56183 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms