Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Pdx1P52946 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.74□□□□□ -0.69
Pdx1P52946 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.74□□□□□ -0.69
Pdx1P52946 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.74□□□□□ -0.69
Pdx1P52946 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pdx1P52946 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
Pdx1P52946 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Mir1896-201ENSMUST00000122641 81 ntBASIC10.73□□□□□ -0.69
Pdx1P52946 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Gm42660-201ENSMUST00000197733 947 ntBASIC10.73□□□□□ -0.69
Pdx1P52946 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.73□□□□□ -0.69
Pdx1P52946 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.73□□□□□ -0.69
Pdx1P52946 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Gm18514-201ENSMUST00000218980 436 ntBASIC10.73□□□□□ -0.69
Pdx1P52946 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Pdx1P52946 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.73□□□□□ -0.69
Pdx1P52946 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Pdx1P52946 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.73□□□□□ -0.69
Pdx1P52946 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdx1P52946 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdx1P52946 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.72□□□□□ -0.69
Pdx1P52946 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Pdx1P52946 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Pdx1P52946 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.72□□□□□ -0.69
Pdx1P52946 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.72□□□□□ -0.69
Pdx1P52946 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pdx1P52946 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.72□□□□□ -0.69
Pdx1P52946 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC10.72□□□□□ -0.69
Pdx1P52946 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.72□□□□□ -0.69
Pdx1P52946 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.72□□□□□ -0.69
Pdx1P52946 Gm27438-201ENSMUST00000183480 110 ntBASIC10.72□□□□□ -0.69
Pdx1P52946 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.72□□□□□ -0.69
Pdx1P52946 Gm28833-201ENSMUST00000189671 559 ntBASIC10.72□□□□□ -0.69
Pdx1P52946 Gm37852-201ENSMUST00000193027 350 ntBASIC10.72□□□□□ -0.69
Pdx1P52946 Gm7047-201ENSMUST00000196224 1063 ntBASIC10.72□□□□□ -0.69
Pdx1P52946 Gm5865-201ENSMUST00000198713 637 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms