Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.48□□□□□ -0.57
Shmt1P50431 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Shmt1P50431 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm14234-201ENSMUST00000119539 845 ntBASIC11.48□□□□□ -0.57
Shmt1P50431 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm14993-201ENSMUST00000121180 164 ntBASIC11.48□□□□□ -0.57
Shmt1P50431 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.48□□□□□ -0.57
Shmt1P50431 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.48□□□□□ -0.57
Shmt1P50431 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm42430-201ENSMUST00000197209 616 ntBASIC11.48□□□□□ -0.57
Shmt1P50431 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm18204-201ENSMUST00000209835 793 ntBASIC11.48□□□□□ -0.57
Shmt1P50431 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.48□□□□□ -0.57
Shmt1P50431 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.48□□□□□ -0.57
Shmt1P50431 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.48□□□□□ -0.57
Shmt1P50431 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Shmt1P50431 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.48□□□□□ -0.57
Shmt1P50431 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Gm21142-201ENSMUST00000179999 2604 ntBASIC11.48□□□□□ -0.57
Shmt1P50431 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Shmt1P50431 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shmt1P50431 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Shmt1P50431 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.47□□□□□ -0.57
Shmt1P50431 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.47□□□□□ -0.57
Shmt1P50431 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.47□□□□□ -0.57
Shmt1P50431 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
Shmt1P50431 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.47□□□□□ -0.57
Shmt1P50431 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.47□□□□□ -0.57
Shmt1P50431 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Shmt1P50431 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.47□□□□□ -0.57
Shmt1P50431 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Shmt1P50431 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Shmt1P50431 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Shmt1P50431 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Shmt1P50431 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Shmt1P50431 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Shmt1P50431 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Shmt1P50431 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Shmt1P50431 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.47□□□□□ -0.57
Shmt1P50431 Gm43778-201ENSMUST00000199438 199 ntBASIC11.47□□□□□ -0.57
Shmt1P50431 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Shmt1P50431 Gm43506-201ENSMUST00000200675 753 ntBASIC11.47□□□□□ -0.57
Shmt1P50431 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Shmt1P50431 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shmt1P50431 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms