Protein–RNA interactions for Protein: P50207

Hoxc13, Homeobox protein Hox-C13, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc13P50207 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.81□□□□□ -0.52
Hoxc13P50207 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc13P50207 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.81□□□□□ -0.52
Hoxc13P50207 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc13P50207 Gm22582-201ENSMUST00000102283 94 ntBASIC11.81□□□□□ -0.52
Hoxc13P50207 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.81□□□□□ -0.52
Hoxc13P50207 Gm6441-201ENSMUST00000120983 696 ntBASIC11.81□□□□□ -0.52
Hoxc13P50207 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.81□□□□□ -0.52
Hoxc13P50207 Gm13857-201ENSMUST00000139645 173 ntBASIC11.81□□□□□ -0.52
Hoxc13P50207 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC11.81□□□□□ -0.52
Hoxc13P50207 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hoxc13P50207 Gm7539-201ENSMUST00000189789 630 ntBASIC11.81□□□□□ -0.52
Hoxc13P50207 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc13P50207 Gm42433-201ENSMUST00000196806 940 ntBASIC11.81□□□□□ -0.52
Hoxc13P50207 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.81□□□□□ -0.52
Hoxc13P50207 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.81□□□□□ -0.52
Hoxc13P50207 BC080696-201ENSMUST00000202858 1218 ntBASIC11.81□□□□□ -0.52
Hoxc13P50207 Gm32111-201ENSMUST00000207689 846 ntBASIC11.81□□□□□ -0.52
Hoxc13P50207 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Gm18001-201ENSMUST00000212023 688 ntBASIC11.81□□□□□ -0.52
Hoxc13P50207 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxc13P50207 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxc13P50207 AC154585.1-201ENSMUST00000218917 997 ntBASIC11.81□□□□□ -0.52
Hoxc13P50207 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.81□□□□□ -0.52
Hoxc13P50207 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Hoxc13P50207 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc13P50207 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxc13P50207 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc13P50207 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.8□□□□□ -0.52
Hoxc13P50207 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc13P50207 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Mir1249-201ENSMUST00000116791 98 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 Gm12489-201ENSMUST00000119364 148 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc13P50207 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Gm27956-201ENSMUST00000175604 260 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 Gm29543-201ENSMUST00000188138 967 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc13P50207 Gm8022-201ENSMUST00000191763 904 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 Gm31941-201ENSMUST00000209689 350 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 Gm18204-201ENSMUST00000209835 793 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.8□□□□□ -0.52
Hoxc13P50207 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc13P50207 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc13P50207 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.8□□□□□ -0.52
Hoxc13P50207 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc13P50207 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc13P50207 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Hoxc13P50207 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc13P50207 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc13P50207 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms