Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 n-R5s124-201ENSMUST00000180334 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm44498-201ENSMUST00000199509 111 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm24089-201ENSMUST00000093696 109 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm9162-201ENSMUST00000182081 991 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm43547-201ENSMUST00000197729 328 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm43506-201ENSMUST00000200675 753 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm33080-201ENSMUST00000205429 172 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 CT025689.1-201ENSMUST00000225214 283 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.31□□□□□ -0.76
Nkx2-6P43688 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-6P43688 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms