Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC13.3□□□□□ -0.28
Nkx1-2P42580 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Nkx1-2P42580 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Mipep-ps-201ENSMUST00000177439 291 ntBASIC13.3□□□□□ -0.28
Nkx1-2P42580 Gm37299-201ENSMUST00000193951 826 ntBASIC13.3□□□□□ -0.28
Nkx1-2P42580 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.3□□□□□ -0.28
Nkx1-2P42580 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.3□□□□□ -0.28
Nkx1-2P42580 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.3□□□□□ -0.28
Nkx1-2P42580 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Gm10263-201ENSMUST00000085163 300 ntBASIC13.3□□□□□ -0.28
Nkx1-2P42580 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC13.3□□□□□ -0.28
Nkx1-2P42580 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 AC165148.1-201ENSMUST00000224795 2372 ntBASIC13.3□□□□□ -0.28
Nkx1-2P42580 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx1-2P42580 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Spata33-207ENSMUST00000212760 4074 ntBASIC13.29□□□□□ -0.28
Nkx1-2P42580 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Gm13408-201ENSMUST00000119822 798 ntBASIC13.29□□□□□ -0.28
Nkx1-2P42580 Gm13935-201ENSMUST00000121859 798 ntBASIC13.29□□□□□ -0.28
Nkx1-2P42580 Gm12570-201ENSMUST00000122047 1030 ntBASIC13.29□□□□□ -0.28
Nkx1-2P42580 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Gm15881-201ENSMUST00000148792 942 ntBASIC13.29□□□□□ -0.28
Nkx1-2P42580 Gm25343-201ENSMUST00000157460 107 ntBASIC13.29□□□□□ -0.28
Nkx1-2P42580 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Gm37466-201ENSMUST00000195692 652 ntBASIC13.29□□□□□ -0.28
Nkx1-2P42580 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.29□□□□□ -0.28
Nkx1-2P42580 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.29□□□□□ -0.28
Nkx1-2P42580 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC13.29□□□□□ -0.28
Nkx1-2P42580 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx1-2P42580 Gm21039-201ENSMUST00000223359 2012 ntBASIC13.29□□□□□ -0.28
Nkx1-2P42580 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx1-2P42580 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx1-2P42580 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx1-2P42580 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx1-2P42580 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx1-2P42580 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx1-2P42580 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx1-2P42580 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx1-2P42580 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx1-2P42580 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx1-2P42580 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx1-2P42580 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkx1-2P42580 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx1-2P42580 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.28□□□□□ -0.28
Nkx1-2P42580 Gm44980-201ENSMUST00000205826 314 ntBASIC13.28□□□□□ -0.28
Nkx1-2P42580 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms