Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nedd8P29595 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nedd8P29595 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nedd8P29595 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.91□□□□□ -0.82
Nedd8P29595 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.91□□□□□ -0.82
Nedd8P29595 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nedd8P29595 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nedd8P29595 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nedd8P29595 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Nedd8P29595 Gm28624-201ENSMUST00000186430 2131 ntBASIC9.91□□□□□ -0.82
Nedd8P29595 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.91□□□□□ -0.82
Nedd8P29595 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nedd8P29595 Rfx2-201ENSMUST00000002444 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nedd8P29595 Gm37302-201ENSMUST00000192958 2998 ntBASIC9.9□□□□□ -0.82
Nedd8P29595 Lipa-201ENSMUST00000049572 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.9□□□□□ -0.82
Nedd8P29595 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nedd8P29595 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.9□□□□□ -0.82
Nedd8P29595 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Mmrn2-201ENSMUST00000111908 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nedd8P29595 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nedd8P29595 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nedd8P29595 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Nedd8P29595 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nedd8P29595 Gm11509-201ENSMUST00000117358 325 ntBASIC9.9□□□□□ -0.82
Nedd8P29595 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.9□□□□□ -0.82
Nedd8P29595 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Gm12592-201ENSMUST00000155332 2954 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.9□□□□□ -0.82
Nedd8P29595 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Gm10807-201ENSMUST00000177134 795 ntBASIC9.9□□□□□ -0.82
Nedd8P29595 Gm26956-201ENSMUST00000182176 986 ntBASIC9.9□□□□□ -0.82
Nedd8P29595 Gm28686-201ENSMUST00000187404 609 ntBASIC9.9□□□□□ -0.82
Nedd8P29595 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC9.9□□□□□ -0.82
Nedd8P29595 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.9□□□□□ -0.82
Nedd8P29595 Gm37008-201ENSMUST00000195712 319 ntBASIC9.9□□□□□ -0.82
Nedd8P29595 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.9□□□□□ -0.82
Nedd8P29595 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.9□□□□□ -0.82
Nedd8P29595 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Nedd8P29595 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nedd8P29595 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nedd8P29595 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Nedd8P29595 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nedd8P29595 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Nedd8P29595 Tmprss13-201ENSMUST00000034597 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nedd8P29595 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC9.9□□□□□ -0.83
Nedd8P29595 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nedd8P29595 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Dpy19l2-201ENSMUST00000133010 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Rad51d-201ENSMUST00000018985 3426 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Nedd8P29595 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Pml-201ENSMUST00000085673 4481 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Nedd8P29595 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Fam53b-202ENSMUST00000097998 4341 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Gm25148-201ENSMUST00000104611 123 ntBASIC9.89□□□□□ -0.83
Nedd8P29595 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
Nedd8P29595 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.89□□□□□ -0.83
Nedd8P29595 Gm11801-201ENSMUST00000117807 746 ntBASIC9.89□□□□□ -0.83
Nedd8P29595 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.89□□□□□ -0.83
Nedd8P29595 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC9.89□□□□□ -0.83
Nedd8P29595 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Gm24990-201ENSMUST00000157406 323 ntBASIC9.89□□□□□ -0.83
Nedd8P29595 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Nedd8P29595 Gm3096-201ENSMUST00000185770 364 ntBASIC9.89□□□□□ -0.83
Nedd8P29595 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.89□□□□□ -0.83
Nedd8P29595 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.89□□□□□ -0.83
Nedd8P29595 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.89□□□□□ -0.83
Nedd8P29595 Morn2-202ENSMUST00000227729 656 ntBASIC9.89□□□□□ -0.83
Nedd8P29595 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.89□□□□□ -0.83
Nedd8P29595 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Nedd8P29595 Rffl-204ENSMUST00000093975 3575 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC9.89□□□□□ -0.83
Nedd8P29595 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nedd8P29595 Sftpa1-202ENSMUST00000170719 2854 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms