Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pde6aP27664 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.59□□□□□ -0.39
Pde6aP27664 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pde6aP27664 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pde6aP27664 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pde6aP27664 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pde6aP27664 AC153524.2-202ENSMUST00000220401 1794 ntBASIC12.58□□□□□ -0.39
Pde6aP27664 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Pde6aP27664 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.58□□□□□ -0.4
Pde6aP27664 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pde6aP27664 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pde6aP27664 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.58□□□□□ -0.4
Pde6aP27664 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pde6aP27664 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.58□□□□□ -0.4
Pde6aP27664 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.58□□□□□ -0.4
Pde6aP27664 Gm8194-201ENSMUST00000159783 859 ntBASIC12.58□□□□□ -0.4
Pde6aP27664 Gm19918-201ENSMUST00000194858 400 ntBASIC12.58□□□□□ -0.4
Pde6aP27664 Gm8684-201ENSMUST00000195078 1564 ntBASIC12.58□□□□□ -0.4
Pde6aP27664 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.58□□□□□ -0.4
Pde6aP27664 Gm45120-201ENSMUST00000208880 408 ntBASIC12.58□□□□□ -0.4
Pde6aP27664 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.58□□□□□ -0.4
Pde6aP27664 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pde6aP27664 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pde6aP27664 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6aP27664 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pde6aP27664 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.57□□□□□ -0.4
Pde6aP27664 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Gm13351-201ENSMUST00000118087 414 ntBASIC12.57□□□□□ -0.4
Pde6aP27664 Gm14219-201ENSMUST00000120414 288 ntBASIC12.57□□□□□ -0.4
Pde6aP27664 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC12.57□□□□□ -0.4
Pde6aP27664 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.57□□□□□ -0.4
Pde6aP27664 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Pde6aP27664 Gm43249-201ENSMUST00000200464 458 ntBASIC12.57□□□□□ -0.4
Pde6aP27664 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pde6aP27664 Gm44605-201ENSMUST00000206892 949 ntBASIC12.57□□□□□ -0.4
Pde6aP27664 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.57□□□□□ -0.4
Pde6aP27664 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.57□□□□□ -0.4
Pde6aP27664 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pde6aP27664 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pde6aP27664 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pde6aP27664 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pde6aP27664 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6aP27664 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.56□□□□□ -0.4
Pde6aP27664 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pde6aP27664 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms