Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm9135-201ENSMUST00000182963 990 ntBASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm38210-201ENSMUST00000191944 809 ntBASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm37017-201ENSMUST00000195266 747 ntBASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm3619-201ENSMUST00000219947 775 ntBASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm18968-201ENSMUST00000221319 862 ntBASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm16380-201ENSMUST00000077997 478 ntBASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf1bP25119 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm14497-201ENSMUST00000119537 580 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Mir1893-201ENSMUST00000122565 83 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm7255-201ENSMUST00000187371 908 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm18776-201ENSMUST00000188833 654 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm28833-201ENSMUST00000189671 559 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm10752-201ENSMUST00000218348 729 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm8255-201ENSMUST00000218693 305 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms