Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
IghmP01872 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
IghmP01872 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
IghmP01872 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
IghmP01872 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.13□□□□□ -0.79
IghmP01872 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Gm25766-201ENSMUST00000104101 131 ntBASIC10.13□□□□□ -0.79
IghmP01872 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
IghmP01872 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.13□□□□□ -0.79
IghmP01872 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Gm26461-201ENSMUST00000175064 290 ntBASIC10.13□□□□□ -0.79
IghmP01872 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.13□□□□□ -0.79
IghmP01872 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
IghmP01872 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.13□□□□□ -0.79
IghmP01872 Gm44551-201ENSMUST00000208804 171 ntBASIC10.13□□□□□ -0.79
IghmP01872 Gm18466-201ENSMUST00000209147 499 ntBASIC10.13□□□□□ -0.79
IghmP01872 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.13□□□□□ -0.79
IghmP01872 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.13□□□□□ -0.79
IghmP01872 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.13□□□□□ -0.79
IghmP01872 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.13□□□□□ -0.79
IghmP01872 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.13□□□□□ -0.79
IghmP01872 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
IghmP01872 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
IghmP01872 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.13□□□□□ -0.79
IghmP01872 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IghmP01872 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.13□□□□□ -0.79
IghmP01872 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.12□□□□□ -0.79
IghmP01872 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.12□□□□□ -0.79
IghmP01872 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
IghmP01872 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.12□□□□□ -0.79
IghmP01872 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.12□□□□□ -0.79
IghmP01872 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.12□□□□□ -0.79
IghmP01872 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.12□□□□□ -0.79
IghmP01872 Gm11331-201ENSMUST00000119764 288 ntBASIC10.12□□□□□ -0.79
IghmP01872 Gm13019-201ENSMUST00000120000 276 ntBASIC10.12□□□□□ -0.79
IghmP01872 B9d1os-201ENSMUST00000137010 674 ntBASIC10.12□□□□□ -0.79
IghmP01872 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
IghmP01872 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
IghmP01872 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
IghmP01872 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.12□□□□□ -0.79
IghmP01872 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
IghmP01872 Gm27910-201ENSMUST00000185004 107 ntBASIC10.12□□□□□ -0.79
IghmP01872 Gm27953-201ENSMUST00000185171 143 ntBASIC10.12□□□□□ -0.79
IghmP01872 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC10.12□□□□□ -0.79
IghmP01872 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.12□□□□□ -0.79
IghmP01872 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.12□□□□□ -0.79
IghmP01872 Gm7319-201ENSMUST00000210047 778 ntBASIC10.12□□□□□ -0.79
IghmP01872 Gm39288-201ENSMUST00000210554 446 ntBASIC10.12□□□□□ -0.79
IghmP01872 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.12□□□□□ -0.79
IghmP01872 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.12□□□□□ -0.79
IghmP01872 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms