Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Mir453-201ENSMUST00000104732 82 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm11892-201ENSMUST00000117711 1202 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm9673-201ENSMUST00000119287 781 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm12899-201ENSMUST00000120565 551 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm10169-201ENSMUST00000121822 348 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Mir6407-201ENSMUST00000184510 101 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm38313-201ENSMUST00000191953 1266 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm37860-201ENSMUST00000195380 1034 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm18753-201ENSMUST00000201000 566 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm45758-201ENSMUST00000212448 1006 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm37242-201ENSMUST00000191873 2085 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Igh-VJ558P01758 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm42521-201ENSMUST00000199190 2040 ntBASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm7319-201ENSMUST00000210047 778 ntBASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm45310-201ENSMUST00000210436 275 ntBASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm45594-201ENSMUST00000211717 241 ntBASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms