Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 AC158777.1-201ENSMUST00000226216 1724 ntBASIC13.16□□□□□ -0.3
NpcdF8VQB8 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm4960-201ENSMUST00000182928 1001 ntBASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm38145-201ENSMUST00000192319 693 ntBASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm6794-201ENSMUST00000203829 457 ntBASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm18124-201ENSMUST00000210695 706 ntBASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm45893-201ENSMUST00000211899 247 ntBASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm3635-201ENSMUST00000212314 354 ntBASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm3926-201ENSMUST00000223378 1123 ntBASIC13.16□□□□□ -0.3
NpcdF8VQB8 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.16□□□□□ -0.3
NpcdF8VQB8 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.16□□□□□ -0.3
NpcdF8VQB8 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NpcdF8VQB8 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.15□□□□□ -0.3
NpcdF8VQB8 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 AC151836.1-201ENSMUST00000228730 1637 ntBASIC13.15□□□□□ -0.3
NpcdF8VQB8 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Gm14633-201ENSMUST00000121152 470 ntBASIC13.15□□□□□ -0.3
NpcdF8VQB8 Gm15373-201ENSMUST00000121495 214 ntBASIC13.15□□□□□ -0.3
NpcdF8VQB8 AA623943-201ENSMUST00000121794 354 ntBASIC13.15□□□□□ -0.3
NpcdF8VQB8 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Gm17799-201ENSMUST00000183270 667 ntBASIC13.15□□□□□ -0.3
NpcdF8VQB8 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC13.15□□□□□ -0.3
NpcdF8VQB8 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.15□□□□□ -0.3
NpcdF8VQB8 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Gm8618-201ENSMUST00000097570 432 ntBASIC13.15□□□□□ -0.3
NpcdF8VQB8 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NpcdF8VQB8 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NpcdF8VQB8 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NpcdF8VQB8 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
NpcdF8VQB8 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
NpcdF8VQB8 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NpcdF8VQB8 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NpcdF8VQB8 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms