Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Gm13426-201ENSMUST00000117887 795 ntBASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Gm14176-201ENSMUST00000121302 477 ntBASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Gm11736-201ENSMUST00000121468 505 ntBASIC12.57□□□□□ -0.4
Clrn2B2RVW2 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Gm4960-201ENSMUST00000182928 1001 ntBASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Gm7242-201ENSMUST00000221134 705 ntBASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Clrn2B2RVW2 AC154197.1-201ENSMUST00000225136 1382 ntBASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Gm23132-201ENSMUST00000104254 132 ntBASIC12.56□□□□□ -0.4
Clrn2B2RVW2 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Gm14148-201ENSMUST00000122433 1008 ntBASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Gm6425-201ENSMUST00000136332 790 ntBASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Gm20091-201ENSMUST00000179683 189 ntBASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Gm7255-201ENSMUST00000187371 908 ntBASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Gm45310-201ENSMUST00000210436 275 ntBASIC12.56□□□□□ -0.4
Clrn2B2RVW2 AC154461.1-201ENSMUST00000224207 1005 ntBASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Atf7-201ENSMUST00000096143 390 ntBASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Gm10537-201ENSMUST00000192625 1698 ntBASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn2B2RVW2 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Gm11473-201ENSMUST00000118980 359 ntBASIC12.55□□□□□ -0.4
Clrn2B2RVW2 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Gm8226-201ENSMUST00000190511 798 ntBASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Gm29808-201ENSMUST00000194419 468 ntBASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Gm5302-201ENSMUST00000202130 796 ntBASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Gm43866-201ENSMUST00000203894 839 ntBASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.55□□□□□ -0.4
Clrn2B2RVW2 AC154477.1-201ENSMUST00000226515 773 ntBASIC12.55□□□□□ -0.4
Clrn2B2RVW2 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.55□□□□□ -0.4
Clrn2B2RVW2 AC137842.2-201ENSMUST00000227734 797 ntBASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Gm8725-201ENSMUST00000221829 1333 ntBASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Clrn2B2RVW2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms