Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Gm11956-201ENSMUST00000119525 512 ntBASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Gm22144-201ENSMUST00000157402 102 ntBASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Gm10774-201ENSMUST00000188689 204 ntBASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Gm23105-201ENSMUST00000083719 134 ntBASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Chaf1aQ9QWF0 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1aQ9QWF0 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Chaf1aQ9QWF0 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1aQ9QWF0 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.21□□□□□ -0.46
Chaf1aQ9QWF0 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Chaf1aQ9QWF0 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1aQ9QWF0 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1aQ9QWF0 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1aQ9QWF0 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1aQ9QWF0 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gm14592-201ENSMUST00000117201 560 ntBASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Mir3547-201ENSMUST00000175461 88 ntBASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1aQ9QWF0 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1aQ9QWF0 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1aQ9QWF0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1aQ9QWF0 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms