Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.84□□□□□ -0.84
Sec61a2Q9JLR1 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Gm37826-201ENSMUST00000195329 322 ntBASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Gm8365-201ENSMUST00000197334 648 ntBASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Gm2594-201ENSMUST00000214774 742 ntBASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Sec61a2Q9JLR1 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Gm1848-201ENSMUST00000120711 789 ntBASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 Gm42657-201ENSMUST00000201746 211 ntBASIC9.82□□□□□ -0.84
Sec61a2Q9JLR1 AC122876.1-201ENSMUST00000217619 825 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms