Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.4□□□□□ -0.75
Ube4bQ9ES00 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ube4bQ9ES00 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ube4bQ9ES00 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ube4bQ9ES00 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ube4bQ9ES00 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 AC153498.1-201ENSMUST00000219775 2722 ntBASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Gm15004-201ENSMUST00000119192 630 ntBASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Gm11941-201ENSMUST00000119904 610 ntBASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Gm2553-201ENSMUST00000215986 605 ntBASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Gm38199-201ENSMUST00000192013 3277 ntBASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube4bQ9ES00 Gm37567-201ENSMUST00000193241 2279 ntBASIC10.38□□□□□ -0.75
Ube4bQ9ES00 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm44062-201ENSMUST00000203312 4857 ntBASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm25668-201ENSMUST00000157700 129 ntBASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm24074-201ENSMUST00000158178 260 ntBASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm37259-201ENSMUST00000193903 849 ntBASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm9353-201ENSMUST00000200472 604 ntBASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm44967-201ENSMUST00000207047 631 ntBASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.38□□□□□ -0.75
Ube4bQ9ES00 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.38□□□□□ -0.75
Ube4bQ9ES00 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm5705-201ENSMUST00000066241 711 ntBASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms