Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
U2af1Q9D883 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
U2af1Q9D883 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC14.27□□□□□ -0.12
U2af1Q9D883 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
U2af1Q9D883 Gm42858-201ENSMUST00000202512 1704 ntBASIC14.27□□□□□ -0.12
U2af1Q9D883 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
U2af1Q9D883 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
U2af1Q9D883 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
U2af1Q9D883 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
U2af1Q9D883 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
U2af1Q9D883 Gm13104-201ENSMUST00000119651 1446 ntBASIC14.27□□□□□ -0.12
U2af1Q9D883 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC14.27□□□□□ -0.12
U2af1Q9D883 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
U2af1Q9D883 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
U2af1Q9D883 Gm22937-201ENSMUST00000103954 131 ntBASIC14.27□□□□□ -0.13
U2af1Q9D883 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC14.27□□□□□ -0.13
U2af1Q9D883 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
U2af1Q9D883 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.27□□□□□ -0.13
U2af1Q9D883 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.27□□□□□ -0.13
U2af1Q9D883 Gm15196-201ENSMUST00000121406 482 ntBASIC14.27□□□□□ -0.13
U2af1Q9D883 Gm12570-201ENSMUST00000122047 1030 ntBASIC14.27□□□□□ -0.13
U2af1Q9D883 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC14.27□□□□□ -0.13
U2af1Q9D883 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.27□□□□□ -0.13
U2af1Q9D883 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC14.27□□□□□ -0.13
U2af1Q9D883 Gm43506-201ENSMUST00000200675 753 ntBASIC14.27□□□□□ -0.13
U2af1Q9D883 Gm44647-201ENSMUST00000207402 428 ntBASIC14.27□□□□□ -0.13
U2af1Q9D883 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.27□□□□□ -0.13
U2af1Q9D883 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC14.27□□□□□ -0.13
U2af1Q9D883 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
U2af1Q9D883 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
U2af1Q9D883 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC14.27□□□□□ -0.13
U2af1Q9D883 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Gm45496-201ENSMUST00000209918 2917 ntBASIC14.27□□□□□ -0.13
U2af1Q9D883 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
U2af1Q9D883 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
U2af1Q9D883 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
U2af1Q9D883 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
U2af1Q9D883 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm8684-201ENSMUST00000195078 1564 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm23612-201ENSMUST00000103823 110 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm15003-201ENSMUST00000118884 446 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm15136-201ENSMUST00000120552 533 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm12745-201ENSMUST00000121767 214 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm15620-201ENSMUST00000122949 270 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm24328-201ENSMUST00000175104 67 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm23576-201ENSMUST00000179918 110 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm9162-201ENSMUST00000182081 991 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 AC153524.2-202ENSMUST00000220401 1794 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm42833-201ENSMUST00000196019 2124 ntBASIC14.26□□□□□ -0.13
U2af1Q9D883 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
U2af1Q9D883 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
U2af1Q9D883 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.25□□□□□ -0.13
U2af1Q9D883 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms