Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm13916-201ENSMUST00000117368 628 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm15374-201ENSMUST00000119313 844 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm18734-201ENSMUST00000172937 808 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm43058-201ENSMUST00000197645 625 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm18056-201ENSMUST00000207670 568 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm18061-201ENSMUST00000208350 562 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm18063-201ENSMUST00000208529 568 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm18052-201ENSMUST00000208750 559 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm5996-201ENSMUST00000211110 718 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm23061-201ENSMUST00000102348 116 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm12196-201ENSMUST00000120954 262 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm24749-201ENSMUST00000157838 343 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm8100-201ENSMUST00000182906 988 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm43553-201ENSMUST00000200900 685 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm8342-201ENSMUST00000209839 757 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 AC158779.1-201ENSMUST00000228912 3861 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms