Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.47□□□□□ -0.57
Usp11Q99K46 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Usp11Q99K46 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Usp11Q99K46 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Usp11Q99K46 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.47□□□□□ -0.57
Usp11Q99K46 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Gm12218-201ENSMUST00000117666 399 ntBASIC11.47□□□□□ -0.57
Usp11Q99K46 Gm8302-201ENSMUST00000119217 852 ntBASIC11.47□□□□□ -0.57
Usp11Q99K46 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.47□□□□□ -0.57
Usp11Q99K46 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Usp11Q99K46 Mir7076-201ENSMUST00000183519 74 ntBASIC11.47□□□□□ -0.57
Usp11Q99K46 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.47□□□□□ -0.57
Usp11Q99K46 Gm9353-201ENSMUST00000200472 604 ntBASIC11.47□□□□□ -0.57
Usp11Q99K46 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.47□□□□□ -0.57
Usp11Q99K46 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.47□□□□□ -0.57
Usp11Q99K46 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.47□□□□□ -0.57
Usp11Q99K46 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.47□□□□□ -0.57
Usp11Q99K46 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.47□□□□□ -0.57
Usp11Q99K46 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Usp11Q99K46 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Usp11Q99K46 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Usp11Q99K46 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.47□□□□□ -0.57
Usp11Q99K46 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Usp11Q99K46 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.46□□□□□ -0.57
Usp11Q99K46 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.46□□□□□ -0.57
Usp11Q99K46 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.46□□□□□ -0.57
Usp11Q99K46 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.46□□□□□ -0.57
Usp11Q99K46 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Usp11Q99K46 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.46□□□□□ -0.57
Usp11Q99K46 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.46□□□□□ -0.57
Usp11Q99K46 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Usp11Q99K46 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.46□□□□□ -0.57
Usp11Q99K46 Gm13422-201ENSMUST00000118834 504 ntBASIC11.46□□□□□ -0.57
Usp11Q99K46 Gm11667-201ENSMUST00000119828 486 ntBASIC11.46□□□□□ -0.57
Usp11Q99K46 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Usp11Q99K46 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Usp11Q99K46 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Usp11Q99K46 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Usp11Q99K46 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Usp11Q99K46 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Usp11Q99K46 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.46□□□□□ -0.57
Usp11Q99K46 Mir7051-201ENSMUST00000184167 73 ntBASIC11.46□□□□□ -0.57
Usp11Q99K46 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.46□□□□□ -0.57
Usp11Q99K46 Gm42867-201ENSMUST00000202995 469 ntBASIC11.46□□□□□ -0.57
Usp11Q99K46 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.46□□□□□ -0.57
Usp11Q99K46 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.46□□□□□ -0.57
Usp11Q99K46 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Usp11Q99K46 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Usp11Q99K46 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Usp11Q99K46 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Usp11Q99K46 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Usp11Q99K46 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Usp11Q99K46 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.46□□□□□ -0.58
Usp11Q99K46 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Usp11Q99K46 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.58
Usp11Q99K46 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.46□□□□□ -0.58
Usp11Q99K46 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Usp11Q99K46 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Usp11Q99K46 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Usp11Q99K46 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Usp11Q99K46 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.46□□□□□ -0.58
Usp11Q99K46 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Usp11Q99K46 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
Usp11Q99K46 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.45□□□□□ -0.58
Usp11Q99K46 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms