Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm23251-201ENSMUST00000103773 110 ntBASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm9133-201ENSMUST00000118289 540 ntBASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm15352-201ENSMUST00000118696 270 ntBASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm28450-201ENSMUST00000187349 638 ntBASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm44315-201ENSMUST00000203041 219 ntBASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm45310-201ENSMUST00000210436 275 ntBASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm21142-201ENSMUST00000179999 2604 ntBASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28aQ8CEI3 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Gm44323-201ENSMUST00000198689 129 ntBASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28aQ8CEI3 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms