Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm9111-201ENSMUST00000219394 709 ntBASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gm44926-201ENSMUST00000207898 1826 ntBASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Serpina3m-201ENSMUST00000101078 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Serpina3m-202ENSMUST00000168797 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 AC123534.1-202ENSMUST00000224256 1837 ntBASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Gm29499-201ENSMUST00000189151 486 ntBASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Gm28329-201ENSMUST00000191208 689 ntBASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Gm29171-201ENSMUST00000191397 486 ntBASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Gm4482-201ENSMUST00000200876 742 ntBASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 5430437J10Rik-202ENSMUST00000227355 634 ntBASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC10.73□□□□□ -0.69
Ccdc28bQ8CEG5 Gm9271-201ENSMUST00000185988 2580 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Gm25890-201ENSMUST00000177643 165 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Gm22614-201ENSMUST00000178300 165 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Gm7741-201ENSMUST00000181445 989 ntBASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccdc28bQ8CEG5 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms