Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Gm14270-201ENSMUST00000118388 846 ntBASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Gm9081-201ENSMUST00000182346 991 ntBASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim9Q8C7M3 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.96□□□□□ -0.5
Trim9Q8C7M3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim9Q8C7M3 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.96□□□□□ -0.5
Trim9Q8C7M3 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim9Q8C7M3 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.96□□□□□ -0.5
Trim9Q8C7M3 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim9Q8C7M3 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim9Q8C7M3 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trim9Q8C7M3 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.96□□□□□ -0.5
Trim9Q8C7M3 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trim9Q8C7M3 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim9Q8C7M3 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trim9Q8C7M3 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm25562-201ENSMUST00000104608 133 ntBASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm14497-201ENSMUST00000119537 580 ntBASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm16030-201ENSMUST00000159098 603 ntBASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm3508-201ENSMUST00000186012 792 ntBASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm5100-201ENSMUST00000195631 589 ntBASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms