Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm17040-202ENSMUST00000170597 889 ntBASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm45310-201ENSMUST00000210436 275 ntBASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm18042-201ENSMUST00000219887 790 ntBASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm5468-202ENSMUST00000227851 682 ntBASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Cdh18-207ENSMUST00000226693 2165 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm14058-201ENSMUST00000116082 735 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm12986-201ENSMUST00000119037 967 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm25661-201ENSMUST00000157704 296 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm4812-201ENSMUST00000182847 993 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm43179-201ENSMUST00000198797 275 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm43852-201ENSMUST00000202098 917 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm18515-201ENSMUST00000219755 797 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scaf4Q6PFF0 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Mir1938-201ENSMUST00000158746 100 ntBASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Gm27953-201ENSMUST00000185171 143 ntBASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Gm37835-201ENSMUST00000193305 361 ntBASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Gm30946-201ENSMUST00000198288 724 ntBASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 AU022133-201ENSMUST00000200601 873 ntBASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Gm44155-201ENSMUST00000203923 412 ntBASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Gm5369-201ENSMUST00000217499 588 ntBASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms