Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 AC159819.3-201ENSMUST00000216940 1837 ntBASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Ash2l-203ENSMUST00000110609 2300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Gm10874-201ENSMUST00000100526 2355 ntTSL 2 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Aplf-202ENSMUST00000065997 3132 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Gm44510-201ENSMUST00000206288 4532 ntBASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Drc3-204ENSMUST00000108723 1917 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Manba-201ENSMUST00000029814 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf220Q6PDX6 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Gm25226-201ENSMUST00000158198 123 ntBASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Gm43184-201ENSMUST00000197247 542 ntBASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Gm43179-201ENSMUST00000198797 275 ntBASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Pygm-202ENSMUST00000113483 2583 ntTSL 5 BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Gm7742-201ENSMUST00000167648 1527 ntBASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Gm7732-201ENSMUST00000170486 1527 ntBASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Gm7740-201ENSMUST00000186171 1527 ntBASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Gm7736-201ENSMUST00000096981 1527 ntBASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Evc-203ENSMUST00000114154 3695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Gm45501-201ENSMUST00000211468 2526 ntBASIC10.27□□□□□ -0.77
Rnf220Q6PDX6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Sh3tc1-207ENSMUST00000201511 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Trpv5-202ENSMUST00000193503 2025 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Dubr-202ENSMUST00000186535 2896 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gm11801-201ENSMUST00000117807 746 ntBASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gm14381-201ENSMUST00000122105 414 ntBASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gm20482-202ENSMUST00000174729 825 ntBASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gm4310-201ENSMUST00000177847 889 ntBASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gm38341-201ENSMUST00000195357 515 ntBASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gm5982-201ENSMUST00000196234 512 ntBASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms