Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Gm22379-201ENSMUST00000157480 131 ntBASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Gm18042-201ENSMUST00000219887 790 ntBASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Gm25580-201ENSMUST00000083409 327 ntBASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcc2Q6PDG5 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Gm25226-201ENSMUST00000158198 123 ntBASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Gm42859-201ENSMUST00000199572 193 ntBASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Gm3619-201ENSMUST00000219947 775 ntBASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Smarcc2Q6PDG5 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Smarcc2Q6PDG5 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smarcc2Q6PDG5 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcc2Q6PDG5 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcc2Q6PDG5 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcc2Q6PDG5 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcc2Q6PDG5 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcc2Q6PDG5 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcc2Q6PDG5 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.67□□□□□ -0.38
Smarcc2Q6PDG5 Mir453-201ENSMUST00000104732 82 ntBASIC12.67□□□□□ -0.38
Smarcc2Q6PDG5 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms