Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Mir675-201ENSMUST00000102320 84 ntBASIC8.31□□□□□ -1.08
NipblQ6KCD5 Gm14676-201ENSMUST00000117722 858 ntBASIC8.31□□□□□ -1.08
NipblQ6KCD5 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Gm13688-201ENSMUST00000121557 608 ntBASIC8.31□□□□□ -1.08
NipblQ6KCD5 Gm24597-201ENSMUST00000122503 300 ntBASIC8.31□□□□□ -1.08
NipblQ6KCD5 Gm9637-201ENSMUST00000179141 873 ntBASIC8.31□□□□□ -1.08
NipblQ6KCD5 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Gm40414-201ENSMUST00000197608 481 ntBASIC8.31□□□□□ -1.08
NipblQ6KCD5 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Gm44498-201ENSMUST00000199509 111 ntBASIC8.31□□□□□ -1.08
NipblQ6KCD5 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
NipblQ6KCD5 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Etfbkmt-201ENSMUST00000047531 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NipblQ6KCD5 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm15599-201ENSMUST00000122283 1345 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm15576-201ENSMUST00000117806 583 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm12133-201ENSMUST00000121775 661 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm28746-201ENSMUST00000187453 380 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 AC174647.1-201ENSMUST00000227419 1271 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 AC140406.3-201ENSMUST00000227619 478 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 AC158519.1-201ENSMUST00000228615 179 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm42913-201ENSMUST00000197936 1853 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm5398-201ENSMUST00000121933 984 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm37597-201ENSMUST00000191853 382 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm44159-201ENSMUST00000204065 442 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm5668-201ENSMUST00000220897 436 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm8174-201ENSMUST00000064353 1001 ntBASIC8.3□□□□□ -1.08
NipblQ6KCD5 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NipblQ6KCD5 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms